IL_7ZW0_081

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_081 not in the Motif Atlas

Geometric match to IL_5MWI_002

Geometric discrepancy: 0.1274

The information below is about IL_5MWI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7ZW0|1|2|G|1642
7ZW0|1|2|U|1643
7ZW0|1|2|C|1644
*
7ZW0|1|2|G|1757
7ZW0|1|2|U|1758
7ZW0|1|2|C|1759

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain Lq

60S ribosomal protein L41-A

Chain sl

Transfer RNA; tRNA

Chain sm

mRNA