IL_7ZW0_086

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUA*UUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_086 not in the Motif Atlas

Geometric match to IL_7RQB_015

Geometric discrepancy: 0.1475

The information below is about IL_7RQB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7ZW0|1|2|U|1665
7ZW0|1|2|U|1666
7ZW0|1|2|A|1667
*
7ZW0|1|2|U|1734
7ZW0|1|2|U|1735
7ZW0|1|2|G|1736

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain LY

60S ribosomal protein L23-A

Chain sV

40S ribosomal protein S8-A