IL_7ZW0_099

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AU*AGUUGU

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|U|147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_099 not in the Motif Atlas

Homologous match to IL_8C3A_007

Geometric discrepancy: 0.0804

The information below is about IL_8C3A_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19724.3

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

7ZW0|1|LA|A|123
7ZW0|1|LA|U|124
*
7ZW0|1|LA|A|144
7ZW0|1|LA|G|145
7ZW0|1|LA|U|146
7ZW0|1|LA|U|147
7ZW0|1|LA|G|148
7ZW0|1|LA|U|149

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LD

5.8S ribosomal RNA; 5.8S rRNA

Chain LK

60S ribosomal protein L8-A

Chain LQ

60S ribosomal protein L15-A