IL_7ZW0_100

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_100 not in the Motif Atlas

Homologous match to IL_8C3A_008

Geometric discrepancy: 0.042

The information below is about IL_8C3A_008

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ZW0|1|LA|C|125
7ZW0|1|LA|U|126
7ZW0|1|LA|G|127
*
7ZW0|1|LA|C|141
7ZW0|1|LA|C|142
7ZW0|1|LA|G|143

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LD

5.8S ribosomal RNA; 5.8S rRNA

Chain LK

60S ribosomal protein L8-A

Chain LQ

60S ribosomal protein L15-A

Chain La

60S ribosomal protein L25

Chain Lk

60S ribosomal protein L35-A