IL_7ZW0_118

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGAUG*CGGAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_118 not in the Motif Atlas

Homologous match to IL_8C3A_028

Geometric discrepancy: 0.0866

The information below is about IL_8C3A_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|C|758
7ZW0|1|LA|U|759
7ZW0|1|LA|G|760
7ZW0|1|LA|A|761
7ZW0|1|LA|U|762
7ZW0|1|LA|G|763
*
7ZW0|1|LA|C|768
7ZW0|1|LA|G|769
7ZW0|1|LA|G|770
7ZW0|1|LA|A|771
7ZW0|1|LA|U|772
7ZW0|1|LA|G|773

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LO

60S ribosomal protein L13-A

Chain Ld

60S ribosomal protein L28

Chain Lr

60S ribosomal protein L42-A