IL_7ZW0_119

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_119 not in the Motif Atlas

Geometric match to IL_5TBW_027

Geometric discrepancy: 0.0814

The information below is about IL_5TBW_027

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7ZW0|1|LA|C|803
7ZW0|1|LA|C|804
7ZW0|1|LA|G|805
*
7ZW0|1|LA|C|938
7ZW0|1|LA|U|939
7ZW0|1|LA|G|940

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LG

60S ribosomal protein L4-A

Chain Ld

60S ribosomal protein L28