IL_7ZW0_131

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AA*UUU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_131 not in the Motif Atlas

Homologous match to IL_8C3A_042

Geometric discrepancy: 0.0889

The information below is about IL_8C3A_042

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7ZW0|1|LA|A|997
7ZW0|1|LA|A|998
*
7ZW0|1|LA|U|1050
7ZW0|1|LA|U|1051
7ZW0|1|LA|U|1052

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LC

5S ribosomal RNA; 5S rRNA

Chain LH

60S ribosomal protein L5

Chain LM

60S ribosomal protein L10

Chain LW

60S ribosomal protein L21-A