IL_7ZW0_133

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUUA*UUCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_133 not in the Motif Atlas

Geometric match to IL_5TBW_041

Geometric discrepancy: 0.0798

The information below is about IL_5TBW_041

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

7ZW0|1|LA|A|1006
7ZW0|1|LA|U|1007
7ZW0|1|LA|U|1008
7ZW0|1|LA|A|1009
*
7ZW0|1|LA|U|1041
7ZW0|1|LA|U|1042
7ZW0|1|LA|C|1043
7ZW0|1|LA|U|1044

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LH

60S ribosomal protein L5

Chain LM

60S ribosomal protein L10

Chain sl

Transfer RNA; tRNA