IL_7ZW0_141

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AUA*UU

Length

5 nucleotides

Bulged bases

7ZW0|1|LA|U|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_141 not in the Motif Atlas

Geometric match to IL_5TBW_050

Geometric discrepancy: 0.1028

The information below is about IL_5TBW_050

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7ZW0|1|LA|A|1180
7ZW0|1|LA|U|1181
7ZW0|1|LA|A|1182
*
7ZW0|1|LA|U|1324
7ZW0|1|LA|U|1325

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LJ

60S ribosomal protein L7-A

Chain LR

60S ribosomal protein L16-A

Chain LV

60S ribosomal protein L20-A

Chain Li

60S ribosomal protein L33-A