IL_7ZW0_147

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_147 not in the Motif Atlas

Geometric match to IL_4V88_397

Geometric discrepancy: 0.2081

The information below is about IL_4V88_397

Detailed Annotation

Major groove platform with extra cWW

Broad Annotation

Major groove platform

Motif group

IL_63959.1

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

18

Unit IDs

7ZW0|1|LA|G|1262
7ZW0|1|LA|A|1263
7ZW0|1|LA|G|1264
7ZW0|1|LA|U|1265
7ZW0|1|LA|G|1266
*
7ZW0|1|LA|C|1275
7ZW0|1|LA|U|1276
7ZW0|1|LA|C|1277

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains