IL_7ZW0_153

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUCAAC*GGAC

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|G|1514

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_153 not in the Motif Atlas

Homologous match to IL_8C3A_066

Geometric discrepancy: 0.0995

The information below is about IL_8C3A_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93630.2

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

4

Unit IDs

7ZW0|1|LA|G|1500
7ZW0|1|LA|U|1501
7ZW0|1|LA|C|1502
7ZW0|1|LA|A|1503
7ZW0|1|LA|A|1504
7ZW0|1|LA|C|1505
*
7ZW0|1|LA|G|1513
7ZW0|1|LA|G|1514
7ZW0|1|LA|A|1515
7ZW0|1|LA|C|1516

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LS

60S ribosomal protein L17-A

Chain LU

60S ribosomal protein L19-A

Chain Lo

60S ribosomal protein L39