IL_7ZW0_157

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*UUUC

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_157 not in the Motif Atlas

Geometric match to IL_4V9F_086

Geometric discrepancy: 0.3548

The information below is about IL_4V9F_086

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_46637.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

20

Unit IDs

7ZW0|1|LA|G|1623
7ZW0|1|LA|G|1624
*
7ZW0|1|LA|U|1819
7ZW0|1|LA|U|1820
7ZW0|1|LA|U|1821
7ZW0|1|LA|C|1822

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain Lj

60S ribosomal protein L34-A

Chain Ln

60S ribosomal protein L38

Chain Lt

60S ribosomal protein L41-A