IL_7ZW0_175

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCAG*CG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|C|2197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_175 not in the Motif Atlas

Homologous match to IL_8C3A_089

Geometric discrepancy: 0.1118

The information below is about IL_8C3A_089

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88739.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7ZW0|1|LA|C|2196
7ZW0|1|LA|C|2197
7ZW0|1|LA|A|2198
7ZW0|1|LA|G|2199
*
7ZW0|1|LA|C|2245
7ZW0|1|LA|G|2246

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain LE

60S ribosomal protein L2-A