IL_7ZW0_185

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAG*UGGG

Length

7 nucleotides

Bulged bases

7ZW0|1|LA|G|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_185 not in the Motif Atlas

Homologous match to IL_8C3A_100

Geometric discrepancy: 0.0544

The information below is about IL_8C3A_100

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

7ZW0|1|LA|U|2423
7ZW0|1|LA|A|2424
7ZW0|1|LA|G|2425
*
7ZW0|1|LA|U|2604
7ZW0|1|LA|G|2605
7ZW0|1|LA|G|2606
7ZW0|1|LA|G|2607

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain LQ

60S ribosomal protein L15-A

Chain Lr

60S ribosomal protein L42-A

Chain sn

Transfer RNA; tRNA