IL_7ZW0_193

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUCC*GC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_193 not in the Motif Atlas

Homologous match to IL_8C3A_110

Geometric discrepancy: 0.0857

The information below is about IL_8C3A_110

Detailed Annotation

Single stack bend with bulge

Broad Annotation

Single stack bend with bulge

Motif group

IL_39137.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LA|G|2770
7ZW0|1|LA|U|2771
7ZW0|1|LA|C|2772
7ZW0|1|LA|C|2773
*
7ZW0|1|LA|G|2787
7ZW0|1|LA|C|2788

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LO

60S ribosomal protein L13-A

Chain LT

60S ribosomal protein L18-A

Chain Ld

60S ribosomal protein L28

Chain Lr

60S ribosomal protein L42-A