IL_7ZW0_211

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CU*AUUG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|U|3078, 7ZW0|1|LA|U|3079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_211 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.0499

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7ZW0|1|LA|C|3063
7ZW0|1|LA|U|3064
*
7ZW0|1|LA|A|3077
7ZW0|1|LA|U|3078
7ZW0|1|LA|U|3079
7ZW0|1|LA|G|3080

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LU

60S ribosomal protein L19-A

Chain Lg

60S ribosomal protein L31-A