IL_7ZW0_218

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAACG*UUG

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|U|3259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_218 not in the Motif Atlas

Homologous match to IL_8C3A_133

Geometric discrepancy: 0.0809

The information below is about IL_8C3A_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60154.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LA|C|3225
7ZW0|1|LA|A|3226
7ZW0|1|LA|A|3227
7ZW0|1|LA|C|3228
7ZW0|1|LA|G|3229
*
7ZW0|1|LA|U|3258
7ZW0|1|LA|U|3259
7ZW0|1|LA|G|3260

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LI

60S ribosomal protein L6-B

Chain LP

60S ribosomal protein L14-A

Chain LR

60S ribosomal protein L16-A