IL_7ZW0_222

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUA*UC

Length

5 nucleotides

Bulged bases

7ZW0|1|LA|U|3319

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_222 not in the Motif Atlas

Geometric match to IL_5TBW_130

Geometric discrepancy: 0.1773

The information below is about IL_5TBW_130

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

7ZW0|1|LA|G|3318
7ZW0|1|LA|U|3319
7ZW0|1|LA|A|3320
*
7ZW0|1|LA|U|3387
7ZW0|1|LA|C|3388

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain Lg

60S ribosomal protein L31-A