IL_8A3D_033

3D structure

PDB id

8A3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

CCACC*GGGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3D|1|A|C|1076
8A3D|1|A|C|1077
8A3D|1|A|A|1078
8A3D|1|A|C|1079
8A3D|1|A|C|1080
*
8A3D|1|A|G|1219
8A3D|1|A|G|1220
8A3D|1|A|G|1234
8A3D|1|A|G|1235

Current chains

Chain A

28S ribosomal RNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain H

60S ribosomal protein L6

Chain m

60S ribosomal protein L7