IL_8A3D_036
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CGAC*GGUCG
- Length
- 9 nucleotides
- Bulged bases
- 8A3D|1|A|C|1202
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8A3D_036 not in the Motif Atlas
- Geometric match to IL_6CZR_168
- Geometric discrepancy: 0.2271
- The information below is about IL_6CZR_168
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67743.1
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 9
Unit IDs
8A3D|1|A|C|1093
8A3D|1|A|G|1094
8A3D|1|A|A|1095
8A3D|1|A|C|1096
*
8A3D|1|A|G|1199
8A3D|1|A|G|1200
8A3D|1|A|U|1201
8A3D|1|A|C|1202
8A3D|1|A|G|1203
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L18a
- Chain N
- 60S ribosomal protein L21
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