IL_8A3D_103

3D structure

PDB id

8A3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3D|1|A|G|3714
8A3D|1|A|PSU|3715
8A3D|1|A|C|3716
8A3D|1|A|A|3717
8A3D|1|A|A2M|3718
8A3D|1|A|A|3719
8A3D|1|A|G|3720
8A3D|1|A|U|3721
*
8A3D|1|A|A|3732
8A3D|1|A|A|3733
8A3D|1|A|U|3734
8A3D|1|A|G|3735
8A3D|1|A|A|3736
8A3D|1|A|A|3737
8A3D|1|A|G|3738
8A3D|1|A|C|3739

Current chains

Chain A

28S ribosomal RNA

Nearby chains

Chain D

60S ribosomal protein L8

Chain c

60S ribosomal protein L36