IL_8A3D_115
3D structure
- PDB id
- 8A3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- GGGGCGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 8A3D|1|A|C|4116, 8A3D|1|A|U|4117, 8A3D|1|A|U|4118, 8A3D|1|A|G|4121
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8A3D|1|A|G|4091
8A3D|1|A|G|4092
8A3D|1|A|G|4093
8A3D|1|A|G|4094
8A3D|1|A|C|4114
8A3D|1|A|G|4115
8A3D|1|A|C|4116
8A3D|1|A|U|4117
8A3D|1|A|U|4118
8A3D|1|A|C|4119
8A3D|1|A|U|4120
8A3D|1|A|G|4121
8A3D|1|A|G|4122
8A3D|1|A|C|4123
8A3D|1|A|G|4124
8A3D|1|A|C|4125
8A3D|1|A|C|4126
8A3D|1|A|A|4127
8A3D|1|A|A|4128
8A3D|1|A|G|4129
*
8A3D|1|A|C|4155
8A3D|1|A|G|4156
8A3D|1|A|A|4157
8A3D|1|A|C|4158
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain R
- 60S ribosomal protein L23a
- Chain T
- 60S ribosomal protein L27
- Chain W
- 60S ribosomal protein L30
- Chain a
- 60S ribosomal protein L34
- Chain j
- 60S ribosomal protein L37a
- Chain n
- 60S ribosomal protein L7a
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