IL_8A3D_155

3D structure

PDB id

8A3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8A3D|1|A|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A3D|1|A|U|5003
8A3D|1|A|C|5004
8A3D|1|A|G|5005
8A3D|1|A|U|5006
8A3D|1|A|A|5007
8A3D|1|A|C|5008
8A3D|1|A|G|5009
*
8A3D|1|A|U|5039
8A3D|1|A|U|5040
8A3D|1|A|G|5041
8A3D|1|A|A|5042
8A3D|1|A|A|5043
8A3D|1|A|A|5044

Current chains

Chain A

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L3

Chain Q

60S ribosomal protein L24

Chain X

60S ribosomal protein L31