IL_8A3L_029
3D structure
- PDB id
- 8A3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural insights into the binding of bS1 to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.42 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 8A3L|1|A|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8A3L_029 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.1109
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
8A3L|1|A|C|569
8A3L|1|A|G|570
8A3L|1|A|U|571
8A3L|1|A|A|572
8A3L|1|A|A|573
8A3L|1|A|A|574
8A3L|1|A|G|575
*
8A3L|1|A|C|880
8A3L|1|A|G|881
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain Q
- 30S ribosomal protein S17
Coloring options: