Loop IL_8A3L

3D structure

PDB id: 8A3L (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structural insights into the binding of bS1 to the ribosome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å

Loop

Sequence: UUGAGCCUUGAUGUGUAGGAUAGGUGGGAGG*CGACCUUGAAAUACCACCCUUUAAUGUUUGA
Length: 62 nucleotides
Bulged bases: 8A3L|1|a|C|2104, 8A3L|1|a|U|2106, 8A3L|1|a|U|2111, 8A3L|1|a|G|2112, 8A3L|1|a|U|2118, 8A3L|1|a|G|2125, 8A3L|1|a|A|2126, 8A3L|1|a|U|2167, 8A3L|1|a|C|2174, 8A3L|1|a|C|2177, 8A3L|1|a|U|2180
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8A3L|1|a|U|2098
8A3L|1|a|U|2099
8A3L|1|a|G|2100
8A3L|1|a|A|2101
8A3L|1|a|G|2102
8A3L|1|a|C|2103
8A3L|1|a|C|2104
8A3L|1|a|U|2105
8A3L|1|a|U|2106
8A3L|1|a|G|2107
8A3L|1|a|A|2108
8A3L|1|a|U|2109
8A3L|1|a|G|2110
8A3L|1|a|U|2111
8A3L|1|a|G|2112
8A3L|1|a|U|2113
8A3L|1|a|A|2114
8A3L|1|a|G|2115
8A3L|1|a|G|2116
8A3L|1|a|A|2117
8A3L|1|a|U|2118
8A3L|1|a|A|2119
8A3L|1|a|G|2120
8A3L|1|a|G|2121
8A3L|1|a|U|2122
8A3L|1|a|G|2123
8A3L|1|a|G|2124
8A3L|1|a|G|2125
8A3L|1|a|A|2126
8A3L|1|a|G|2127
8A3L|1|a|G|2128
*
8A3L|1|a|C|2161
8A3L|1|a|G|2162
8A3L|1|a|A|2163
8A3L|1|a|C|2164
8A3L|1|a|C|2165
8A3L|1|a|U|2166
8A3L|1|a|U|2167
8A3L|1|a|G|2168
8A3L|1|a|A|2169
8A3L|1|a|A|2170
8A3L|1|a|A|2171
8A3L|1|a|U|2172
8A3L|1|a|A|2173
8A3L|1|a|C|2174
8A3L|1|a|C|2175
8A3L|1|a|A|2176
8A3L|1|a|C|2177
8A3L|1|a|C|2178
8A3L|1|a|C|2179
8A3L|1|a|U|2180
8A3L|1|a|U|2181
8A3L|1|a|U|2182
8A3L|1|a|A|2183
8A3L|1|a|A|2184
8A3L|1|a|U|2185
8A3L|1|a|G|2186
8A3L|1|a|U|2187
8A3L|1|a|U|2188
8A3L|1|a|U|2189
8A3L|1|a|G|2190
8A3L|1|a|A|2191

Current chains

Chain a: 23S ribosomal RNA

Nearby chains

Chain W: Transfer RNA; tRNA
Chain h: 50S ribosomal protein L9

IL_8A3L_193