IL_8A57_042

3D structure

PDB id

8A57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CUUAGACAAC*GUCGAG

Length

16 nucleotides

Bulged bases

8A57|1|A|A|1092

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A57|1|A|C|1089
8A57|1|A|U|1090
8A57|1|A|U|1091
8A57|1|A|A|1092
8A57|1|A|G|1093
8A57|1|A|A|1094
8A57|1|A|C|1095
8A57|1|A|A|1096
8A57|1|A|A|1097
8A57|1|A|C|1098
*
8A57|1|A|G|1153
8A57|1|A|U|1154
8A57|1|A|C|1155
8A57|1|A|G|1156
8A57|1|A|A|1157
8A57|1|A|G|1158

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L6