IL_8A57_117

3D structure

PDB id

8A57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

ACUAGGGGCC*GGUUACCGAAU

Length

21 nucleotides

Bulged bases

8A57|1|A|A|943

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8A57|1|A|A|922
8A57|1|A|C|923
8A57|1|A|U|924
8A57|1|A|A|925
8A57|1|A|G|926
8A57|1|A|G|927
8A57|1|A|G|928
8A57|1|A|G|929
8A57|1|A|C|930
8A57|1|A|C|931
*
8A57|1|A|G|939
8A57|1|A|G|940
8A57|1|A|U|941
8A57|1|A|U|942
8A57|1|A|A|943
8A57|1|A|C|944
8A57|1|A|C|945
8A57|1|A|G|946
8A57|1|A|A|947
8A57|1|A|A|948
8A57|1|A|U|949

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L16