IL_8AAF_097

3D structure

PDB id

8AAF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state G

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AAF|1|f|G|2451
8AAF|1|f|G|2452
8AAF|1|f|U|2453
8AAF|1|f|G|2454
8AAF|1|f|U|2455
8AAF|1|f|A|2456
8AAF|1|f|G|2457
8AAF|1|f|A|2458
8AAF|1|f|A|2459
8AAF|1|f|U|2460
8AAF|1|f|A|2461
8AAF|1|f|A|2462
*
8AAF|1|f|U|2493
8AAF|1|f|A|2494
8AAF|1|f|C|2495

Current chains

Chain f

25S rRNA

Nearby chains

Chain a

Ribosome quality control complex subunit 2

Chain w

60S ribosomal protein L1-A