IL_8AGV_097

3D structure

PDB id

8AGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state H

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AGV|1|f|G|2451
8AGV|1|f|G|2452
8AGV|1|f|U|2453
8AGV|1|f|G|2454
8AGV|1|f|U|2455
8AGV|1|f|A|2456
8AGV|1|f|G|2457
8AGV|1|f|A|2458
8AGV|1|f|A|2459
8AGV|1|f|U|2460
8AGV|1|f|A|2461
8AGV|1|f|A|2462
*
8AGV|1|f|U|2493
8AGV|1|f|A|2494
8AGV|1|f|C|2495

Current chains

Chain f

25S rRNA

Nearby chains

Chain w

60S ribosomal protein L1-A