IL_8AGV_150

3D structure

PDB id

8AGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state H

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUG*CUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8AGV_150 not in the Motif Atlas

Homologous match to IL_5EL4_358

Geometric discrepancy: 0.3081

The information below is about IL_5EL4_358

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AGV|1|y|G|5
8AGV|1|y|U|6
8AGV|1|y|G|7
*
8AGV|1|y|C|66
8AGV|1|y|U|67
8AGV|1|y|C|68

Current chains

Chain y

Ala tRNA

Nearby chains

Chain v

Eukaryotic translation initiation factor 5A-1