IL_8AGW_036

3D structure

PDB id

8AGW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state D

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGUAUC*GAAG

Length

10 nucleotides

Bulged bases

8AGW|1|f|U|981, 8AGW|1|f|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AGW|1|f|C|977
8AGW|1|f|G|978
8AGW|1|f|U|979
8AGW|1|f|A|980
8AGW|1|f|U|981
8AGW|1|f|C|982
*
8AGW|1|f|G|1101
8AGW|1|f|A|1102
8AGW|1|f|A|1103
8AGW|1|f|G|1104

Current chains

Chain f

25S rRNA

Nearby chains

Chain D

60S ribosomal protein L18-A

Chain O

60S ribosomal protein L29

Chain o

60S ribosomal protein L7-A