IL_8AGW_036
3D structure
- PDB id
- 8AGW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state D
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGUAUC*GAAG
- Length
- 10 nucleotides
- Bulged bases
- 8AGW|1|f|U|981, 8AGW|1|f|A|1103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8AGW_036 not in the Motif Atlas
- Homologous match to IL_9PN5_035
- Geometric discrepancy: 0.1721
- The information below is about IL_9PN5_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27774.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8AGW|1|f|C|977
8AGW|1|f|G|978
8AGW|1|f|U|979
8AGW|1|f|A|980
8AGW|1|f|U|981
8AGW|1|f|C|982
*
8AGW|1|f|G|1101
8AGW|1|f|A|1102
8AGW|1|f|A|1103
8AGW|1|f|G|1104
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L18-A
- Chain O
- 60S ribosomal protein L29
- Chain o
- 60S ribosomal protein L7-A
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