IL_8AGW_096

3D structure

PDB id

8AGW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state D

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGUGUAGAAUAA*UAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AGW|1|f|G|2451
8AGW|1|f|G|2452
8AGW|1|f|U|2453
8AGW|1|f|G|2454
8AGW|1|f|U|2455
8AGW|1|f|A|2456
8AGW|1|f|G|2457
8AGW|1|f|A|2458
8AGW|1|f|A|2459
8AGW|1|f|U|2460
8AGW|1|f|A|2461
8AGW|1|f|A|2462
*
8AGW|1|f|U|2493
8AGW|1|f|A|2494
8AGW|1|f|C|2495

Current chains

Chain f

25S rRNA

Nearby chains

Chain w

60S ribosomal protein L1-A