IL_8AGZ_017
3D structure
- PDB id
- 8AGZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAGACAUGGUGUUUUGUAUUUCACUGG*CAUAAUG
- Length
- 34 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8AGZ|1|f|C|435
8AGZ|1|f|A|436
8AGZ|1|f|G|437
8AGZ|1|f|A|438
8AGZ|1|f|C|439
8AGZ|1|f|A|440
8AGZ|1|f|U|441
8AGZ|1|f|G|442
8AGZ|1|f|G|443
8AGZ|1|f|U|444
8AGZ|1|f|G|445
8AGZ|1|f|U|446
8AGZ|1|f|U|447
8AGZ|1|f|U|448
8AGZ|1|f|U|449
8AGZ|1|f|G|450
8AGZ|1|f|U|451
8AGZ|1|f|A|486
8AGZ|1|f|U|487
8AGZ|1|f|U|488
8AGZ|1|f|U|489
8AGZ|1|f|C|490
8AGZ|1|f|A|491
8AGZ|1|f|C|492
8AGZ|1|f|U|493
8AGZ|1|f|G|494
8AGZ|1|f|G|495
*
8AGZ|1|f|C|618
8AGZ|1|f|A|619
8AGZ|1|f|U|620
8AGZ|1|f|A|621
8AGZ|1|f|A|622
8AGZ|1|f|U|623
8AGZ|1|f|G|624
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L17-A
- Chain R
- 60S ribosomal protein L32
- Chain S
- 60S ribosomal protein L33-A
- Chain n
- 60S ribosomal protein L6-B
Coloring options: