IL_8AGZ_097
3D structure
- PDB id
- 8AGZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGUGUAGAAUAA*UAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8AGZ|1|f|G|2451
8AGZ|1|f|G|2452
8AGZ|1|f|U|2453
8AGZ|1|f|G|2454
8AGZ|1|f|U|2455
8AGZ|1|f|A|2456
8AGZ|1|f|G|2457
8AGZ|1|f|A|2458
8AGZ|1|f|A|2459
8AGZ|1|f|U|2460
8AGZ|1|f|A|2461
8AGZ|1|f|A|2462
*
8AGZ|1|f|U|2493
8AGZ|1|f|A|2494
8AGZ|1|f|C|2495
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain a
- RQC2 isoform 1
- Chain w
- 60S ribosomal protein L1-A
Coloring options: