IL_8ANA_106
3D structure
- PDB id
- 8ANA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- CCU*AGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ANA_106 not in the Motif Atlas
- Homologous match to IL_4WF9_114
- Geometric discrepancy: 0.1135
- The information below is about IL_4WF9_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10810.1
- Basepair signature
- cWW-L-cWS-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
8ANA|1|b|C|30
8ANA|1|b|C|31
8ANA|1|b|U|32
*
8ANA|1|b|A|50
8ANA|1|b|G|51
8ANA|1|b|A|52
8ANA|1|b|A|53
8ANA|1|b|G|54
Current chains
- Chain b
- 5S ribosomal RNA
Nearby chains
- Chain f
- 50S ribosomal protein L5
- Chain n
- 50S ribosomal protein L18
Coloring options: