IL_8ANA_110
3D structure
- PDB id
- 8ANA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8ANA|1|a|U|846, 8ANA|1|a|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ANA_110 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.0913
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8ANA|1|a|A|844
8ANA|1|a|A|845
8ANA|1|a|U|846
8ANA|1|a|U|847
8ANA|1|a|C|848
*
8ANA|1|a|G|930
8ANA|1|a|U|931
8ANA|1|a|U|932
8ANA|1|a|A|933
8ANA|1|a|U|934
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain y
- 50S ribosomal protein L30
Coloring options: