IL_8ANA_119

3D structure

PDB id

8ANA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GCAAGGGGGU*ACUUACCAACC

Length

21 nucleotides

Bulged bases

8ANA|1|a|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ANA|1|a|G|875
8ANA|1|a|C|876
8ANA|1|a|A|877
8ANA|1|a|A|878
8ANA|1|a|G|879
8ANA|1|a|G|880
8ANA|1|a|G|881
8ANA|1|a|G|882
8ANA|1|a|G|883
8ANA|1|a|U|884
*
8ANA|1|a|A|892
8ANA|1|a|C|893
8ANA|1|a|U|894
8ANA|1|a|U|895
8ANA|1|a|A|896
8ANA|1|a|C|897
8ANA|1|a|C|898
8ANA|1|a|A|899
8ANA|1|a|A|900
8ANA|1|a|C|901
8ANA|1|a|C|902

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L16