3D structure

PDB id
8ANY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
8ANY|1|A|A|1804, 8ANY|1|A|U|1807
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ANY|1|A|C|1672
8ANY|1|A|U|1673
8ANY|1|A|A|1674
8ANY|1|A|A|1675
8ANY|1|A|A|1676
8ANY|1|A|C|1677
8ANY|1|A|C|1678
*
8ANY|1|A|G|1797
8ANY|1|A|A|1798
8ANY|1|A|U|1799
8ANY|1|A|G|1800
8ANY|1|A|A|1801
8ANY|1|A|A|1802
8ANY|1|A|A|1803
8ANY|1|A|A|1804
8ANY|1|A|A|1805
8ANY|1|A|U|1806
8ANY|1|A|U|1807
8ANY|1|A|A|1808
8ANY|1|A|U|1809
8ANY|1|A|A|1810
8ANY|1|A|A|1811
8ANY|1|A|C|1812
8ANY|1|A|C|1813
8ANY|1|A|A|1814
8ANY|1|A|A|1815
8ANY|1|A|G|1816

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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