3D structure

PDB id
8ANY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
CAUAAUCACUUG*CCUG
Length
16 nucleotides
Bulged bases
8ANY|1|A|A|2601, 8ANY|1|A|U|2607, 8ANY|1|A|U|2626
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ANY|1|A|C|2597
8ANY|1|A|A|2598
8ANY|1|A|U|2599
8ANY|1|A|A|2600
8ANY|1|A|A|2601
8ANY|1|A|U|2602
8ANY|1|A|C|2603
8ANY|1|A|A|2604
8ANY|1|A|C|2605
8ANY|1|A|U|2606
8ANY|1|A|U|2607
8ANY|1|A|G|2608
*
8ANY|1|A|C|2624
8ANY|1|A|C|2625
8ANY|1|A|U|2626
8ANY|1|A|G|2627

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain A3
Aurora kinase A-interacting protein
Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain Aw
A/A-tRNA

Coloring options:

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