IL_8ANY_043
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GCAA*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ANY_043 not in the Motif Atlas
- Geometric match to IL_7RQB_093
- Geometric discrepancy: 0.1534
- The information below is about IL_7RQB_093
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_63450.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 8
Unit IDs
8ANY|1|A|G|2943
8ANY|1|A|C|2944
8ANY|1|A|A|2945
8ANY|1|A|A|2946
*
8ANY|1|A|U|2980
8ANY|1|A|A|2981
8ANY|1|A|C|2982
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain Aw
- A/A-tRNA
- Chain Ax
- Transfer RNA; tRNA
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: