IL_8ANY_044
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 8ANY|1|A|U|2978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ANY_044 not in the Motif Atlas
- Homologous match to IL_7RQB_094
- Geometric discrepancy: 0.1392
- The information below is about IL_7RQB_094
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_92788.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
8ANY|1|A|A|2946
8ANY|1|A|U|2947
8ANY|1|A|C|2948
*
8ANY|1|A|G|2976
8ANY|1|A|G|2977
8ANY|1|A|U|2978
8ANY|1|A|U|2979
8ANY|1|A|U|2980
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain Aw
- A/A-tRNA
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: