IL_8ANY_049

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

8ANY|1|A|A|3059, 8ANY|1|A|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ANY_049 not in the Motif Atlas

Homologous match to IL_5J7L_341

Geometric discrepancy: 0.081

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

8ANY|1|A|C|2999
8ANY|1|A|A|3000
*
8ANY|1|A|U|3058
8ANY|1|A|A|3059
8ANY|1|A|C|3060
8ANY|1|A|G|3061

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Aw

A/A-tRNA

Chain E

39S ribosomal protein L3, mitochondrial

Chain K

39S ribosomal protein L13, mitochondrial