IL_8AP4_075

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GU(G7M)A*UCC

Length

7 nucleotides

Bulged bases

8AP4|1|a|U|2068

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8AP4_075 not in the Motif Atlas

Homologous match to IL_5J7L_323

Geometric discrepancy: 0.1284

The information below is about IL_5J7L_323

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8AP4|1|a|G|2067
8AP4|1|a|U|2068
8AP4|1|a|G7M|2069
8AP4|1|a|A|2070
*
8AP4|1|a|U|2441
8AP4|1|a|C|2442
8AP4|1|a|C|2443

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4

Chain k

50S ribosomal protein L15