3D structure

PDB id
8AYE (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome bound to thermorubin and fMet-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
1.96 Å

Loop

Sequence
CCG*CUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8AYE_079 not in the Motif Atlas
Geometric match to IL_7RQB_017
Geometric discrepancy: 0.031
The information below is about IL_7RQB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_86319.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
270

Unit IDs

8AYE|1|a|C|672
8AYE|1|a|C|673
8AYE|1|a|G|674
*
8AYE|1|a|C|806
8AYE|1|a|U|807
8AYE|1|a|G|808

Current chains

Chain a
23S rRNA

Nearby chains

Chain e
50S ribosomal protein L4
Chain k
50S ribosomal protein L15

Coloring options:


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