IL_8AYE_095

3D structure

PDB id

8AYE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome bound to thermorubin and fMet-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.96 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

8AYE|1|a|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8AYE_095 not in the Motif Atlas

Geometric match to IL_8B0X_095

Geometric discrepancy: 0.3087

The information below is about IL_8B0X_095

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

8AYE|1|a|G|880
8AYE|1|a|G|881
*
8AYE|1|a|U|895
8AYE|1|a|A|896
8AYE|1|a|C|897

Current chains

Chain a

23S rRNA

Nearby chains