IL_8B6C_164

3D structure

PDB id

8B6C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8B6C|1|5|G|4780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B6C|1|5|U|4742
8B6C|1|5|C|4743
8B6C|1|5|G|4744
8B6C|1|5|U|4745
8B6C|1|5|A|4746
8B6C|1|5|C|4747
8B6C|1|5|G|4748
*
8B6C|1|5|U|4778
8B6C|1|5|U|4779
8B6C|1|5|G|4780
8B6C|1|5|A|4781
8B6C|1|5|A|4782
8B6C|1|5|A|4783

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

Ribosomal protein L24

Chain d

60S ribosomal protein L31