IL_8B7Y_019

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUGAAGAA*UGUAAAGUA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B7Y|1|C|U|407
8B7Y|1|C|A|408
8B7Y|1|C|U|409
8B7Y|1|C|G|410
8B7Y|1|C|A|411
8B7Y|1|C|A|412
8B7Y|1|C|G|413
8B7Y|1|C|A|414
8B7Y|1|C|A|415
*
8B7Y|1|C|U|427
8B7Y|1|C|G|428
8B7Y|1|C|U|429
8B7Y|1|C|A|430
8B7Y|1|C|A|431
8B7Y|1|C|A|432
8B7Y|1|C|G|433
8B7Y|1|C|U|434
8B7Y|1|C|A|435

Current chains

Chain C

16S ribosomal RNA

Nearby chains

Chain F

30S ribosomal protein S4