IL_8B7Y_105

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

8B7Y|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B7Y|1|I|C|1043
8B7Y|1|I|C|1044
8B7Y|1|I|C|1045
8B7Y|1|I|A|1046
8B7Y|1|I|G|1047
8B7Y|1|I|A|1048
8B7Y|1|I|C|1049
8B7Y|1|I|A|1050
8B7Y|1|I|G|1051
8B7Y|1|I|C|1052
*
8B7Y|1|I|G|1107
8B7Y|1|I|U|1108
8B7Y|1|I|C|1109
8B7Y|1|I|G|1110
8B7Y|1|I|A|1111
8B7Y|1|I|G|1112

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L6

Chain m

50S ribosomal protein L36