IL_8B7Y_148

3D structure

PDB id

8B7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

8B7Y|1|I|A|2163, 8B7Y|1|I|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B7Y|1|I|G|2124
8B7Y|1|I|G|2125
8B7Y|1|I|A|2126
8B7Y|1|I|G|2127
8B7Y|1|I|G|2128
*
8B7Y|1|I|C|2160
8B7Y|1|I|C|2161
8B7Y|1|I|G|2162
8B7Y|1|I|A|2163
8B7Y|1|I|C|2164
8B7Y|1|I|C|2165
8B7Y|1|I|U|2166
8B7Y|1|I|U|2167
8B7Y|1|I|G|2168
8B7Y|1|I|A|2169
8B7Y|1|I|A|2170
8B7Y|1|I|A|2171
8B7Y|1|I|U|2172
8B7Y|1|I|A|2173
8B7Y|1|I|C|2174

Current chains

Chain I

23S ribosomal RNA

Nearby chains