IL_8BF7_181

3D structure

PDB id

8BF7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGGGUAGA*UGCGAAUAC

Length

17 nucleotides

Bulged bases

8BF7|1|0|G|914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BF7|1|0|G|856
8BF7|1|0|G|857
8BF7|1|0|G|858
8BF7|1|0|G|859
8BF7|1|0|U|860
8BF7|1|0|A|861
8BF7|1|0|G|862
8BF7|1|0|A|863
*
8BF7|1|0|U|913
8BF7|1|0|G|914
8BF7|1|0|C|915
8BF7|1|0|G|916
8BF7|1|0|A|917
8BF7|1|0|A|918
8BF7|1|0|U|919
8BF7|1|0|A|920
8BF7|1|0|C|921

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain 1

5S ribosomal RNA; 5S rRNA

Chain J

50S ribosomal protein L16

Chain T

50S ribosomal protein L27

Chain W

50S ribosomal protein L30